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Nextflow作业管理命令

医疗智能体 EIHealth-获取任务信息:命令示例

命令示例获取task列表 health nextflow get task -j "7991e0b4-bffe-4166-ac2e-45a261592dcc"{ "tasks": [ { "task_id": "1", "process": "readfile", "hash": "f2/a0f16c", "status": "RUNNING", "container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536", "pod_name": "nf-f2a0f16c66bbe8e28824e8ccabbddd25", "submit": "2023-03-09T08:50:37Z" } ], "count": 1} 获取task详情 health nextflow get task 1 -j "7991e0b4-bffe-4166-ac2e-45a261592dcc"{"id": "1","command": "\n echo /test;sleep 1000;echo \"end /test\";\n ","status": "RUNNING","exit": 2147483647,"work_dir": "/nextflow/__nextflow_work__/e6dcd289-dadb-48d9-b53b-e0c6c256932e/mb79e5e6-1b14-41b4-ac3b-e8fb0122d64d/f2/a0f16c66bbe8e28824e8ccabbddd25","module": [],"container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536","attempt": 1,"execution_time": {"submit": "2023-03-09T08:50:37Z","start": "2023-03-09T08:50:40Z"},"resource_requested": {"container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536","cpus": 1},"resource_usage": {}} 获取task日志 health nextflow get task 1 -j "7991e0b4-bffe-4166-ac2e-45a261592dcc" -t logs{ "count": 1, "logs": [ "2023-03-09T08:50:44Z /test\n" ]}

医疗智能体 EIHealth Nextflow作业管理命令