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Nextflow作业管理

医疗智能体 EIHEALTH-获取任务信息:命令示例

命令示例获取task列表 health nextflow get task -j "7991e0b4-bffe-4166-ac2e-45a261592dcc" { "tasks": [ { "task_id": "1", "process": "readfile", "hash": "f2/a0f16c", "status": "RUNNING", "container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536", "pod_name": "nf-f2a0f16c66bbe8e28824e8ccabbddd25", "submit": "2023-03-09T08:50:37Z" } ], "count": 1 } 获取task详情 health nextflow get task 1 -j "7991e0b4-bffe-4166-ac2e-45a261592dcc" { "id": "1", "command": "\n echo /test;sleep 1000;echo \"end /test\";\n ", "status": "RUNNING", "exit": 2147483647, "work_dir": "/nextflow/__nextflow_work__/e6dcd289-dadb-48d9-b53b-e0c6c256932e/mb79e5e6-1b14-41b4-ac3b-e8fb0122d64d/f2/a0f16c66bbe8e28824e8ccabbddd25", "module": [], "container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536", "attempt": 1, "execution_time": { "submit": "2023-03-09T08:50:37Z", "start": "2023-03-09T08:50:40Z" }, "resource_requested": { "container": "swr.xxx/eihealth-0659ea54-5ae6-4e9d-b014-a2b041a26f62/admet:2.0.0.1659942728536", "cpus": 1 }, "resource_usage": {} } 获取task日志 health nextflow get task 1 -j "7991e0b4-bffe-4166-ac2e-45a261592dcc" -t logs { "count": 1, "logs": [ "2023-03-09T08:50:44Z /test\n" ] }

医疗智能体 EIHEALTH Nextflow作业管理命令
医疗智能体 EIHEALTH-获取Nextflow作业日志:响应示例

响应示例状态码： 200 OK { "count" : 1, "logs" : [ "Nextflow log" ], "download_url" : "https://nextflow-cn-north-4-07d79450.obs.cn-north-4.ulanqab.huawei.com/__nextflow_run__/xxx-xxx-xxx/xx-xxxx-xxxxx/DAG.png?AccessKeyId=ABCDE&Expires=1676759470&Signature=DDDDD" }

医疗智能体 EIHEALTH Nextflow作业管理
医疗智能体 EIHEALTH-获取Nextflow作业日志:URI

URI GET /v1/{project_id}/eihealth-projects/{eihealth_project_id}/nextflow/jobs/{job_id}/logs 表1 路径参数参数是否必选参数类型描述 project_id 是 String 华为云项目ID，您可以从获取项目ID中获取。最小长度：1 最大长度：128 eihealth_project_id 是 String 平台项目ID，您可以在平台单击所需的项目名称，进入项目设置页面查看。最小长度：1 最大长度：128 job_id 是 String 作业id 最小长度：1 最大长度：128

医疗智能体 EIHEALTH Nextflow作业管理
医疗智能体 EIHEALTH-获取Nextflow作业详情:响应示例

响应示例状态码： 200 OK { "id" : "baabcb56-5bb6-11eb-8a0d-fa163e3ddba1", "name" : "demo-job", "description" : "description", "labels" : [ "labelA", "labelB" ], "status" : "COMPLETED", "has_ignore_failed_tasks" : false, "create_time" : "2021-01-30T02:53:26Z", "finish_time" : "2021-01-30T02:53:26Z", "workflow_name" : "demo-workflow", "workflow_id" : "56e0f1b0-ac10-46a5-8fa7-b26831d7d488", "command_line" : "nextflow run main.nf", "params" : [ { "name" : "p1", "value" : "hello", "type" : "Other", "description" : "desc", "required" : true } ], "config_files" : [ "nextflow.config" ], "config_context" : "config content" }

医疗智能体 EIHEALTH Nextflow作业管理
医疗智能体 EIHEALTH-获取Nextflow作业详情:URI

URI GET /v1/{project_id}/eihealth-projects/{eihealth_project_id}/nextflow/jobs/{job_id} 表1 路径参数参数是否必选参数类型描述 eihealth_project_id 是 String 平台项目ID，您可以在平台单击所需的项目名称，进入项目设置页面查看。最小长度：1 最大长度：128 job_id 是 String 作业id 最小长度：1 最大长度：128 project_id 是 String 华为云项目ID，您可以从获取项目ID中获取。最小长度：1 最大长度：128

医疗智能体 EIHEALTH Nextflow作业管理